Bug description
Using the latest git clone and setting TAG to 4.1.2 (I've also tried the version the documentation suggests which is 3.1.1), am having a lot of issues trying to get this up and running.
If I use the 'docker-compose-non-dev.yml' file, I get issues relating to 'gcc' not installed so it fails to install psycopg2.
If I use the 'docker-compose-image-tag.yml' file, I get issues relating to 'uv' not being installed so it just fails in general to do much of anything.
Screenshots/recordings
No response
Superset version
master / latest-dev
Python version
3.11
Node version
Not applicable
Browser
Not applicable
Additional context
Installing local overrides at /app/docker/requirements-local.txt
Resolved 1 package in 285ms
Building psycopg2==2.9.10
× Failed to build psycopg2==2.9.10
├─▶ The build backend returned an error
╰─▶ Call to setuptools.build_meta:__legacy__.build_wheel failed (exit
status: 1)
[stdout]
running bdist_wheel
running build
running build_py
creating build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/pool.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/tz.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/errorcodes.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/_json.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/errors.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/extensions.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/extras.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/_range.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/_ipaddress.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/__init__.py -> build/lib.linux-x86_64-cpython-311/psycopg2
copying lib/sql.py -> build/lib.linux-x86_64-cpython-311/psycopg2
running build_ext
building 'psycopg2._psycopg' extension
creating build/temp.linux-x86_64-cpython-311/psycopg
gcc -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall
-fPIC "-DPSYCOPG_VERSION=2.9.10 (dt dec pq3 ext lo64)"
-DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=150012 -DHAVE_LO64=1
-DPSYCOPG_DEBUG=1 -I/tmp/.tmpHMnmky/builds-v0/.tmpzy1XIq/include
-I/usr/local/include/python3.11 -I.
-I/usr/include/postgresql -I/usr/include/postgresql/15/server
-I/usr/include/libxml2 -c psycopg/adapter_asis.c -o
build/temp.linux-x86_64-cpython-311/psycopg/adapter_asis.o
-Wdeclaration-after-statement
[stderr]
/tmp/.tmpHMnmky/builds-v0/.tmpzy1XIq/lib/python3.11/site-packages/setuptools/dist.py:759:
SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a
SPDX license expression:
License :: OSI Approved :: GNU Library or Lesser General Public
License (LGPL)
See
https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license
for details.
********************************************************************************
!!
self._finalize_license_expression()
It appears you are missing some prerequisite to build the package from
source.
You may install a binary package by installing 'psycopg2-binary' from
PyPI.
If you want to install psycopg2 from source, please install the packages
required for the build and try again.
For further information please check the 'doc/src/install.rst' file
(also at
<https://www.psycopg.org/docs/install.html>).
error: command 'gcc' failed: No such file or directory
hint: This usually indicates a problem with the package or the build
environment.
Checklist
- [x] I have searched Superset docs and Slack and didn't find a solution to my problem.
- [x] I have searched the GitHub issue tracker and didn't find a similar bug report.
- [x] I have checked Superset's logs for errors and if I found a relevant Python stacktrace, I included it here as text in the "additional context" section.
Comment From: dosubot[bot]
Hello @ray73864! 👋 I'm Dosu, a bot here to help you solve bugs, answer your questions, and navigate the world of contributing. While you wait for a human maintainer, feel free to share your concerns, and I'll do my best to assist you! 😊
To resolve the issues you're encountering with 'gcc' and 'uv' in the Superset Docker environment, you can follow these steps:
- Install
gccfor Building psycopg2: - When using
docker-compose-non-dev.yml, ensure thatgccis installed in the Docker environment. You can modify the Dockerfile or the bootstrap script to include the installation ofgcc:bash apt-get update && apt-get install -y gcc -
This will allow the
psycopg2package to be built from source. -
Resolve 'uv' Command Not Found:
- If you're using
docker-compose-image-tag.ymland encountering issues with 'uv', you can modify thedocker-bootstrap.shscript to usepipinstead ofuvfor package installation. Replace the existing content with:bash pip install --no-cache-dir -r "${REQUIREMENTS_LOCAL}" -
Alternatively, you can create and activate a virtual environment to ensure dependencies are installed correctly:
bash python -m venv .venv source .venv/bin/activate -
Use a Specific Version of Superset:
- If the above solutions do not resolve the issue, consider using a specific version of Superset that might not have these dependencies. For example, you can check out version 4.1.1:
bash git fetch --tags git checkout 4.1.1 docker-compose up
These steps should help address the build issues related to missing packages in your Superset Docker setup [1][2][3].
To continue talking to Dosu, mention @dosu.
Help Dosu learn! Give it feedback: Great Response | Irrelevant Answer | Incorrect Sources | Too Verbose | Hallucination | Bug Report | Other
Comment From: rusackas
Does it work if you install gcc and/or uv? I think @mistercrunch might have merged some PRs recently that updated some of how this works. We might need to make some additions to this page to clarify here.
Comment From: mistercrunch
It should work if you checkout the branch/tag of the version you're trying to fire up prior to launching docker-compose
export TAG=3.1.0
git checkout $TAG
docker-compose -f docker-compose-image-tag.yml
Comment From: mistercrunch
Fixing the docs here -> https://github.com/apache/superset/pull/33045
Comment From: ray73864
git checkout $TAG doesn't work though.
If I follow the instructions here: https://superset.apache.org/docs/installation/docker-compose
It says to do 'git clone --depth=1', if I do that then the git checkout $TAG comes back saying error: pathspec '4.1.2' did not match any file(s) known to git, doesn't matter if I try 3.1.1, 3.1.0, 4.1.2, etc...
Comment From: mistercrunch
oh, shallow clone, does git fetch origin $TAG puts you back on track? maybe we remove the shallow clone advice or add something about running git fetch. Sucks to clone the whole repo for a particular branch...
Comment From: mistercrunch
Added another comment + command to my PR updating the docs
Comment From: ray73864
Following the quickstart guide worked, but that meant downloading the entire repo, which was pretty large, I still had my TAG set at 4.1.2 when I ran the docker-compose-image-tag.yml after following the quickstart.
Comment From: ray73864
Actually, logging into my superset instance shows 'Development' in red in the top right corner, so the quickstart guide didn't actually work at all.
Comment From: mistercrunch
I think all docker-compose setups will show that tag. It's related to the warning here ->
It's pretty easy to remove the tag, but shouldn't treat that set up as production.
Comment From: ray73864
So I did:
git clone --depth=1 https://github.com/apache/superset.git
cd superset
export TAG=4.1.2
git fetch origin $TAG
git checkout $TAG
And it all comes back with error: pathspec '4.1.2' did not match any file(s) known to git
Comment From: mistercrunch
git fetch --depth=1 origin tag $TAG
updated the docs in that other PR. Might just be easier to not instruct people to shallow-clone at this point, but sticking to it
Comment From: ray73864
git fetch --depth=1 origin tag $TAG
remote: Enumerating objects: 61093, done.
remote: Counting objects: 100% (61086/61086), done.
remote: Compressing objects: 100% (31903/31903), done.
remote: Total 57218 (delta 39121), reused 40380 (delta 24004), pack-reused 0 (from 0)
Receiving objects: 100% (57218/57218), 258.24 MiB | 15.47 MiB/s, done.
Resolving deltas: 100% (39121/39121), completed with 2602 local objects.
From https://github.com/apache/superset
* [new tag] 4.1.2 -> 4.1.2
* [new tag] 0.10.0 -> 0.10.0
* [new tag] 0.11.0 -> 0.11.0
* [new tag] 0.12.0 -> 0.12.0
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* [new tag] 0.19.1 -> 0.19.1
* [new tag] 0.2.1 -> 0.2.1
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* [new tag] 0.25-fork -> 0.25-fork
* [new tag] 0.29.0rc1 -> 0.29.0rc1
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* [new tag] 0.9.1 -> 0.9.1
* [new tag] 2020.51.1 -> 2020.51.1
* [new tag] 4.1.0 -> 4.1.0
* [new tag] 4.1.0rc1 -> 4.1.0rc1
* [new tag] 4.1.0rc2 -> 4.1.0rc2
* [new tag] 4.1.0rc3 -> 4.1.0rc3
* [new tag] 4.1.0rc4 -> 4.1.0rc4
* [new tag] 4.1.1 -> 4.1.1
* [new tag] 4.1.1rc1 -> 4.1.1rc1
* [new tag] 4.1.2rc1 -> 4.1.2rc1
* [new tag] airbnb_prod.0.10.0.2 -> airbnb_prod.0.10.0.2
* [new tag] airbnb_prod.0.11.0.1 -> airbnb_prod.0.11.0.1
* [new tag] airbnb_prod.0.11.0.2 -> airbnb_prod.0.11.0.2
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* [new tag] airbnb_prod.0.11.0.5 -> airbnb_prod.0.11.0.5
* [new tag] airbnb_prod.0.11.0.6 -> airbnb_prod.0.11.0.6
* [new tag] airbnb_prod.0.12.0.1 -> airbnb_prod.0.12.0.1
* [new tag] airbnb_prod.0.12.1.0 -> airbnb_prod.0.12.1.0
* [new tag] airbnb_prod.0.13.0.0 -> airbnb_prod.0.13.0.0
* [new tag] airbnb_prod.0.13.0.1 -> airbnb_prod.0.13.0.1
* [new tag] airbnb_prod.0.13.0.2 -> airbnb_prod.0.13.0.2
* [new tag] airbnb_prod.0.13.0.3 -> airbnb_prod.0.13.0.3
* [new tag] airbnb_prod.0.15.0.1 -> airbnb_prod.0.15.0.1
* [new tag] airbnb_prod.0.15.4.1 -> airbnb_prod.0.15.4.1
* [new tag] airbnb_prod.0.15.4.2 -> airbnb_prod.0.15.4.2
* [new tag] airbnb_prod.0.15.5.0 -> airbnb_prod.0.15.5.0
* [new tag] dummy -> dummy
* [new tag] rm -> rm
* [new tag] superset-helm-chart-0.1.0 -> superset-helm-chart-0.1.0
* [new tag] superset-helm-chart-0.1.1 -> superset-helm-chart-0.1.1
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* [new tag] superset-helm-chart-0.1.3 -> superset-helm-chart-0.1.3
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* [new tag] superset-helm-chart-0.1.6 -> superset-helm-chart-0.1.6
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* [new tag] superset-helm-chart-0.10.1 -> superset-helm-chart-0.10.1
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* [new tag] superset-helm-chart-0.11.1 -> superset-helm-chart-0.11.1
* [new tag] superset-helm-chart-0.11.2 -> superset-helm-chart-0.11.2
* [new tag] superset-helm-chart-0.12.0 -> superset-helm-chart-0.12.0
* [new tag] superset-helm-chart-0.12.1 -> superset-helm-chart-0.12.1
* [new tag] superset-helm-chart-0.12.10 -> superset-helm-chart-0.12.10
* [new tag] superset-helm-chart-0.12.11 -> superset-helm-chart-0.12.11
* [new tag] superset-helm-chart-0.12.2 -> superset-helm-chart-0.12.2
* [new tag] superset-helm-chart-0.12.3 -> superset-helm-chart-0.12.3
* [new tag] superset-helm-chart-0.12.4 -> superset-helm-chart-0.12.4
* [new tag] superset-helm-chart-0.12.5 -> superset-helm-chart-0.12.5
* [new tag] superset-helm-chart-0.12.6 -> superset-helm-chart-0.12.6
* [new tag] superset-helm-chart-0.12.7 -> superset-helm-chart-0.12.7
* [new tag] superset-helm-chart-0.12.8 -> superset-helm-chart-0.12.8
* [new tag] superset-helm-chart-0.12.9 -> superset-helm-chart-0.12.9
* [new tag] superset-helm-chart-0.2.0 -> superset-helm-chart-0.2.0
* [new tag] superset-helm-chart-0.2.1 -> superset-helm-chart-0.2.1
* [new tag] superset-helm-chart-0.3.0 -> superset-helm-chart-0.3.0
* [new tag] superset-helm-chart-0.3.1 -> superset-helm-chart-0.3.1
* [new tag] superset-helm-chart-0.3.10 -> superset-helm-chart-0.3.10
* [new tag] superset-helm-chart-0.3.11 -> superset-helm-chart-0.3.11
* [new tag] superset-helm-chart-0.3.12 -> superset-helm-chart-0.3.12
* [new tag] superset-helm-chart-0.3.2 -> superset-helm-chart-0.3.2
* [new tag] superset-helm-chart-0.3.3 -> superset-helm-chart-0.3.3
* [new tag] superset-helm-chart-0.3.4 -> superset-helm-chart-0.3.4
* [new tag] superset-helm-chart-0.3.5 -> superset-helm-chart-0.3.5
* [new tag] superset-helm-chart-0.3.6 -> superset-helm-chart-0.3.6
* [new tag] superset-helm-chart-0.3.7 -> superset-helm-chart-0.3.7
* [new tag] superset-helm-chart-0.3.8 -> superset-helm-chart-0.3.8
* [new tag] superset-helm-chart-0.3.9 -> superset-helm-chart-0.3.9
* [new tag] superset-helm-chart-0.4.0 -> superset-helm-chart-0.4.0
* [new tag] superset-helm-chart-0.5.0 -> superset-helm-chart-0.5.0
* [new tag] superset-helm-chart-0.5.1 -> superset-helm-chart-0.5.1
* [new tag] superset-helm-chart-0.5.10 -> superset-helm-chart-0.5.10
* [new tag] superset-helm-chart-0.5.2 -> superset-helm-chart-0.5.2
* [new tag] superset-helm-chart-0.5.3 -> superset-helm-chart-0.5.3
* [new tag] superset-helm-chart-0.5.4 -> superset-helm-chart-0.5.4
* [new tag] superset-helm-chart-0.5.5 -> superset-helm-chart-0.5.5
* [new tag] superset-helm-chart-0.5.6 -> superset-helm-chart-0.5.6
* [new tag] superset-helm-chart-0.5.7 -> superset-helm-chart-0.5.7
* [new tag] superset-helm-chart-0.5.8 -> superset-helm-chart-0.5.8
* [new tag] superset-helm-chart-0.5.9 -> superset-helm-chart-0.5.9
* [new tag] superset-helm-chart-0.6.0 -> superset-helm-chart-0.6.0
* [new tag] superset-helm-chart-0.6.1 -> superset-helm-chart-0.6.1
* [new tag] superset-helm-chart-0.6.2 -> superset-helm-chart-0.6.2
* [new tag] superset-helm-chart-0.6.3 -> superset-helm-chart-0.6.3
* [new tag] superset-helm-chart-0.6.4 -> superset-helm-chart-0.6.4
* [new tag] superset-helm-chart-0.6.5 -> superset-helm-chart-0.6.5
* [new tag] superset-helm-chart-0.6.6 -> superset-helm-chart-0.6.6
* [new tag] superset-helm-chart-0.7.0 -> superset-helm-chart-0.7.0
* [new tag] superset-helm-chart-0.7.1 -> superset-helm-chart-0.7.1
* [new tag] superset-helm-chart-0.7.2 -> superset-helm-chart-0.7.2
* [new tag] superset-helm-chart-0.7.3 -> superset-helm-chart-0.7.3
* [new tag] superset-helm-chart-0.7.4 -> superset-helm-chart-0.7.4
* [new tag] superset-helm-chart-0.7.6 -> superset-helm-chart-0.7.6
* [new tag] superset-helm-chart-0.7.7 -> superset-helm-chart-0.7.7
* [new tag] superset-helm-chart-0.8.0 -> superset-helm-chart-0.8.0
* [new tag] superset-helm-chart-0.8.1 -> superset-helm-chart-0.8.1
* [new tag] superset-helm-chart-0.8.10 -> superset-helm-chart-0.8.10
* [new tag] superset-helm-chart-0.8.2 -> superset-helm-chart-0.8.2
* [new tag] superset-helm-chart-0.8.3 -> superset-helm-chart-0.8.3
* [new tag] superset-helm-chart-0.8.4 -> superset-helm-chart-0.8.4
* [new tag] superset-helm-chart-0.8.5 -> superset-helm-chart-0.8.5
* [new tag] superset-helm-chart-0.8.6 -> superset-helm-chart-0.8.6
* [new tag] superset-helm-chart-0.8.7 -> superset-helm-chart-0.8.7
* [new tag] superset-helm-chart-0.8.8 -> superset-helm-chart-0.8.8
* [new tag] superset-helm-chart-0.8.9 -> superset-helm-chart-0.8.9
* [new tag] superset-helm-chart-0.9.0 -> superset-helm-chart-0.9.0
* [new tag] superset-helm-chart-0.9.1 -> superset-helm-chart-0.9.1
* [new tag] superset-helm-chart-0.9.2 -> superset-helm-chart-0.9.2
* [new tag] superset-helm-chart-0.9.3 -> superset-helm-chart-0.9.3
* [new tag] superset-helm-chart-0.9.4 -> superset-helm-chart-0.9.4
* [new tag] test_tag -> test_tag
* [new tag] v2020.51.0 -> v2020.51.0
* [new tag] v2021.10.0 -> v2021.10.0
* [new tag] v2021.13.0 -> v2021.13.0
* [new tag] v2021.15.0 -> v2021.15.0
* [new tag] v2021.17.0 -> v2021.17.0
* [new tag] v2021.18.0 -> v2021.18.0
* [new tag] v2021.19.0 -> v2021.19.0
* [new tag] v2021.20.0 -> v2021.20.0
* [new tag] v2021.21.0 -> v2021.21.0
* [new tag] v2021.22.0 -> v2021.22.0
* [new tag] v2021.23.0 -> v2021.23.0
* [new tag] v2021.23.1 -> v2021.23.1
* [new tag] v2021.24.0 -> v2021.24.0
* [new tag] v2021.25.0 -> v2021.25.0
* [new tag] v2021.27.0 -> v2021.27.0
* [new tag] v2021.27.1 -> v2021.27.1
* [new tag] v2021.29.0 -> v2021.29.0
* [new tag] v2021.3.0 -> v2021.3.0
* [new tag] v2021.31.0 -> v2021.31.0
* [new tag] v2021.34.0 -> v2021.34.0
* [new tag] v2021.35.0 -> v2021.35.0
* [new tag] v2021.36.0 -> v2021.36.0
* [new tag] v2021.36.5 -> v2021.36.5
* [new tag] v2021.38.0 -> v2021.38.0
* [new tag] v2021.40.0 -> v2021.40.0
* [new tag] v2021.41.0 -> v2021.41.0
* [new tag] v2021.5.0 -> v2021.5.0
* [new tag] v2021.5.1 -> v2021.5.1
* [new tag] v2021.6.0 -> v2021.6.0
* [new tag] v2021.7.0 -> v2021.7.0
* [new tag] v2021.8.0 -> v2021.8.0
* [new tag] v2021.9.0 -> v2021.9.0
* [new tag] v2021.9.4 -> v2021.9.4
:)
Comment From: ray73864
docker compose -f docker-compose-image-tag.yml up
I made sure I deleted all the volumes created in the past so that it should be clean, despite all that, I still have 'Development' in big red, and an example database.
I feel like the docker-compose file is ignoring the export TAG=4.1.2 and just using the 'local-dev' instead.
Comment From: mistercrunch
Oh it sounds like you're expecting the development tag to not show, but it's actually expected to be there when using any docker-compose set up. If you want to confirm the version, it might show at the bottom right of the Settings menu.
Comment From: ray73864
Yeah, I don't want it there at all, it's unprofessional if I was to give it to a sales person, etc...
Comment From: mistercrunch
Running in docker compose is the part that's "unprofessional" - the way it's set up in the repo it's not meant to support production use cases. Check out helm/k8s or minikube if you're less ambitious
Comment From: ray73864
The server is a virtual machine running on VMWare ESXI, I don't see 'docker' as unprofessional, it's the easiest way to do what I need as I have other docker containers I am utilising for various things too.
I also don't have the time or patience to learn helm/k8s, tried it with my homelab running TrueNAS Scale + TrueCharts and quite frankly didn't enjoy it one bit.
The whole point of going with docker was isolation of each 'system' per-se.
It would be nice if even in the 'docker' setup, the 'Development' could be removed, that should be users choice.
My intention of trying Superset was because I didn't like Metabase, and I'm hoping to try something that moves us away from Phocas.
Comment From: mistercrunch
Docker is great, it's part of the foundation of much of what we do.
Now our docker-compose is a bit shallow and ourdocker-compose.*.yml files, in this repo, are meant to support development and "sandboxing" use cases (like trying a version locally, or running a proof of concept of some kind). So it's a mix of docker compose not being a proper orchestrator to support production services (though one could probably do that if they wanted) and the way we built our own docker-compose files here.
minikube seemed pretty decent as a single-instance alternative, maybe we need to improve our docs there. Last I tried it took a few commands to run.
Comment From: mistercrunch
One last thing, if you go the docker-compose route (wouldn't recommend and won't support personally) you can easily remove the development tag - though I'd pay special attention to the metadata database - make sure it's persisted/backed-up somehow.
Comment From: rusackas
Closing this as "question answered" / not-planned. We don't currently advocate using docker compose in prod... even if you theoretically can.